C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: integrin beta 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134262 Itgb5-004 ENSMUSG00000022817 10090 + 16:33885026-33910585 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000134262
Transcript ID Brain Placenta
ENSMUST00000134262 6.534±0.00 17.153±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HE CIL_0008HE_0002 VISTA 16:33792411-34395018

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296181 ITGB5-001 protein_coding Homo_sapiens 0 590
ENST00000465464 ITGB5-003 nonsense_mediated_decay Homo_sapiens 2e-26 124
ENST00000474838 ITGB5-007 processed_transcript Homo_sapiens 2e-36 156
ENST00000476988 ITGB5-009 processed_transcript Homo_sapiens 0 440
ENST00000481591 ITGB5-008 protein_coding Homo_sapiens 0 424
ENST00000488466 ITGB5-010 protein_coding Homo_sapiens 6e-35 152
ENST00000496703 ITGB5-011 protein_coding Homo_sapiens 4e-36 156
ENST00000608657 ITGB5-013 protein_coding Homo_sapiens 0.0000000000002 81

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