C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein, transmembrane 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134281 Rnft2-006 ENSMUSG00000032850 10090 - 5:118193572-118229145 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverMusclePlacentaTestisENSMUST00000134281
Transcript ID Colon Liver Muscle Placenta Testis
ENSMUST00000134281 0.796±0.00 0.128±0.12 0.420±0.00 1.052±0.52 0.331±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YS CIL_0004YS_0002 CGP 5:118190736-118266093

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000074979 rnft2-201 protein_coding Danio_rerio 0 195
ENST00000257575 RNFT2-001 protein_coding Homo_sapiens 0 765
ENST00000392549 RNFT2-201 protein_coding Homo_sapiens 0 765
ENST00000407967 RNFT2-002 protein_coding Homo_sapiens 0 634
ENST00000547718 RNFT2-003 nonsense_mediated_decay Homo_sapiens 0 634

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