C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein, transmembrane 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000074979 rnft2-201 ENSDARG00000053019 7955 - 5:13005308-13032130 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000074979
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000074979 9.606±2.98 1.597±0.44 2.765±1.88 0.024±0.00 0.845±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YS CIL_0004YS_0001 CGP 5:13005308-13048594

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117177 Rnft2-001 protein_coding Mus_musculus 0 305
ENSMUST00000121369 Rnft2-002 protein_coding Mus_musculus 0 305
ENSMUST00000134281 Rnft2-006 retained_intron Mus_musculus 0 195

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