C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HIV TAT specific factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134785 Htatsf1-003 ENSMUSG00000067873 10090 + X:57053898-57057204 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastLiverPlacentaTestisENSMUST00000134785
Transcript ID Adipose Bladder Breast Liver Placenta Testis
ENSMUST00000134785 1.320±0.00 1.428±0.00 0.580±0.01 0.683±0.15 6.139±3.02 1.126±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000K2 CIL_0000K2_0002 CGP X:57043074-57067183
CIL_0000K3 CIL_0000K3_0002 CGP X:57053583-57106540

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218364 HTATSF1-001 protein_coding Homo_sapiens 0 261
ENST00000422268 HTATSF1P-001 processed_pseudogene Homo_sapiens 0.0000004 60
ENST00000422677 HTATSF1P-001 processed_pseudogene Homo_sapiens 0.0000004 60
ENST00000425695 HTATSF1-003 protein_coding Homo_sapiens 0 261
ENST00000432008 HTATSF1P-001 processed_pseudogene Homo_sapiens 0.0000004 60
ENST00000436166 HTATSF1P-001 processed_pseudogene Homo_sapiens 0.0000004 60
ENST00000437306 HTATSF1P-001 processed_pseudogene Homo_sapiens 0.0000004 60
ENST00000439003 HTATSF1P-001 processed_pseudogene Homo_sapiens 0.0000004 60
ENST00000448450 HTATSF1-002 protein_coding Homo_sapiens 0 261
ENST00000455641 HTATSF1P-001 processed_pseudogene Homo_sapiens 0.0000004 60
ENST00000535601 HTATSF1-201 protein_coding Homo_sapiens 0 261

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