| Transcript ID | Brain | Liver | Ovary |
|---|---|---|---|
| ENSMUST00000134863 | 4.462±0.50 | 4.410±0.00 | 3.581±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | interferon regulatory factor 9 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000134863  |
Irf9-002 |
ENSMUSG00000002325 |
10090 | + |
14:55603571-55610030  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00031B | CIL_00031B_0002 | CGP | 14:55587441-55603693 |
| CIL_00023F | CIL_00023F_0002 | CGP | 14:55591708-55610030 |
| CIL_0001CI | CIL_0001CI_0002 | CGP | 14:55603571-55625395 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000975 | IEA | regulatory region DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IEA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0045351 | IMP | type I interferon biosynthetic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000396864
|
IRF9-001 | protein_coding | Homo_sapiens | 0 | 505 |
|
ENST00000557894
|
IRF9-004 | protein_coding | Homo_sapiens | 0 | 368 |
|
ENST00000558468
|
IRF9-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 505 |
|
ENST00000559229
|
IRF9-009 | retained_intron | Homo_sapiens | 0 | 322 |
|
ENST00000560542
|
IRF9-011 | retained_intron | Homo_sapiens | 0 | 348 |
|
ENST00000561342
|
IRF9-014 | nonsense_mediated_decay | Homo_sapiens | 0 | 405 |
|
ENST00000561415
|
IRF9-003 | retained_intron | Homo_sapiens | 0 | 484 |
