C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001CI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213928-ENSG00000100918 CGP 9606 14:24161053-24180257
GeneTranscriptPositionBiotype
ENSG00000259529 (IRF9)
interferon regulatory factor 9
ENST00000558468 (IRF9-001) 24151218-24167402 nonsense_mediated_decay
CIL_0001CI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002325-ENSMUSG00000002324 CGP 10090 14:55603571-55625395
GeneTranscriptPositionBiotype
ENSMUSG00000002324 (Rec8)
REC8 meiotic recombination protein
ENSMUST00000002395 (Rec8-001) 55618037-55625395 protein_coding
ENSMUST00000140335 (Rec8-002) 55618183-55618816 retained_intron
ENSMUST00000141425 (Rec8-003) 55623569-55624510 retained_intron
ENSMUST00000155193 (Rec8-004) 55624919-55625395 retained_intron
ENSMUSG00000002325 (Irf9)
interferon regulatory factor 9
ENSMUST00000126269 (Irf9-006) 55607275-55608733 retained_intron
ENSMUST00000130697 (Irf9-001) 55603985-55610030 protein_coding
ENSMUST00000134863 (Irf9-002) 55603571-55610030 protein_coding
ENSMUST00000136109 (Irf9-005) 55604577-55605860 retained_intron
ENSMUST00000138037 (Irf9-003) 55604579-55610030 protein_coding
ENSMUST00000145680 (Irf9-004) 55605820-55610027 retained_intron
ENSMUSG00000047098 (Rnf31)
ring finger protein 31
ENSMUST00000019443 (Rnf31-001) 55591708-55603693 protein_coding
ENSMUST00000126544 (Rnf31-003) 55592467-55592948 retained_intron
ENSMUST00000133903 (Rnf31-004) 55598385-55598950 retained_intron
ENSMUST00000137296 (Rnf31-002) 55591744-55597656 nonsense_mediated_decay
ENSMUST00000140178 (Rnf31-005) 55592275-55603664 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CI_0001ENSG00000259529ENST00000558468CIL_0001CI_0002ENSMUSG00000002324ENSMUST00000002395ENSMUST00000140335ENSMUST00000141425ENSMUST00000155193ENSMUSG00000002325ENSMUST00000126269ENSMUST00000130697ENSMUST00000134863ENSMUST00000136109ENSMUST00000138037ENSMUST00000145680ENSMUSG00000047098ENSMUST00000019443ENSMUST00000126544ENSMUST00000133903ENSMUST00000137296ENSMUST00000140178
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CI_0001ENSG00000259529ENST00000558468CIL_0001CI_0002ENSMUSG00000002324ENSMUST00000002395ENSMUST00000140335ENSMUST00000141425ENSMUST00000155193ENSMUSG00000002325ENSMUST00000126269ENSMUST00000130697ENSMUST00000134863ENSMUST00000138037ENSMUST00000145680ENSMUSG00000047098ENSMUST00000019443ENSMUST00000140178
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000259529 ENST00000558468 N/A N/A 1.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002324 ENSMUST00000002395 3.797±3.82 3.585±1.43 0.750±0.23 4.365±0.00 0.337±0.22 0.744±0.19 0.095±0.04 3.535±0.83 1.081±0.69 2.064±0.80 0.050±0.03 2.806±1.08 5.949±3.68 26.714±7.93
ENSMUST00000140335 N/A N/A N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A 0.235±0.00 N/A N/A N/A
ENSMUST00000141425 N/A N/A N/A 0.085±0.00 N/A N/A 0.045±0.00 N/A N/A N/A N/A 1.723±0.00 N/A 18.021±0.00
ENSMUST00000155193 N/A N/A N/A N/A 0.420±0.03 N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000002325 ENSMUST00000126269 N/A 42.254±6.70 N/A N/A 42.951±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130697 15.403±2.45 19.968±4.44 12.689±0.13 3.092±0.61 23.623±3.92 12.741±3.87 6.124±0.52 10.714±1.76 11.957±4.25 22.940±2.98 1.590±0.27 16.164±6.34 9.858±2.37 1.315±0.56
ENSMUST00000134863 N/A N/A N/A 4.462±0.50 N/A N/A N/A N/A 4.410±0.00 N/A N/A 3.581±0.00 N/A N/A
ENSMUST00000136109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138037 N/A 22.032±1.04 N/A N/A 19.341±1.93 N/A N/A 6.956±0.00 6.740±1.35 N/A 2.051±0.26 11.436±3.61 13.326±7.78 N/A
ENSMUST00000145680 N/A N/A N/A N/A 4.586±0.00 N/A N/A N/A 3.750±0.00 N/A N/A 2.460±0.00 N/A N/A
ENSMUSG00000047098 ENSMUST00000019443 7.032±0.99 9.455±2.83 7.977±0.19 5.967±1.17 12.821±2.65 8.445±2.37 4.322±1.16 4.784±0.79 4.690±1.79 10.484±0.87 3.496±0.36 7.183±1.79 10.372±4.79 0.924±0.40
ENSMUST00000126544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140178 6.328±1.03 9.526±2.19 N/A 4.361±1.30 9.765±1.41 10.849±3.00 3.873±0.54 5.990±1.11 4.248±1.24 8.256±0.89 N/A 13.045±1.68 N/A 2.620±0.52

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