C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog gene family, member T1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134894 Rhot1-003 ENSMUSG00000017686 10090 + 11:80242611-80266744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000134894
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000134894 7.223±0.48 4.247±1.17 8.971±0.03 5.039±1.40 5.594±1.36 1.655±0.14 7.749±1.39 3.021±0.39 2.887±0.41 4.433±0.86 3.834±0.60 3.841±0.83 3.544±1.47 8.427±3.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VO CIL_0000VO_0002 CGP 11:80209019-80355955

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333942 RHOT1-001 protein_coding Homo_sapiens 0 1474
ENST00000354266 RHOT1-004 protein_coding Homo_sapiens 0 1474
ENST00000358365 RHOT1-002 protein_coding Homo_sapiens 0 1474
ENST00000394692 RHOT1-008 protein_coding Homo_sapiens 0 1474
ENST00000545287 RHOT1-015 protein_coding Homo_sapiens 0 2254
ENST00000578205 RHOT1-007 nonsense_mediated_decay Homo_sapiens 0 1474
ENST00000580392 RHOT1-012 protein_coding Homo_sapiens 0 547
ENST00000580976 RHOT1-010 processed_transcript Homo_sapiens 0 505
ENST00000581031 RHOT1-005 nonsense_mediated_decay Homo_sapiens 0 1696
ENST00000581094 RHOT1-006 protein_coding Homo_sapiens 0 1474
ENST00000581148 RHOT1-013 protein_coding Homo_sapiens 0 688
ENST00000581567 RHOT1-011 retained_intron Homo_sapiens 0 313
ENST00000582602 RHOT1-018 protein_coding Homo_sapiens 0 826
ENST00000583994 RHOT1-003 nonsense_mediated_decay Homo_sapiens 0 1474
ENST00000584692 RHOT1-014 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000584852 RHOT1-017 protein_coding Homo_sapiens 0 237

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