C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 3A (BRIGHT-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135005 Arid3a-004 ENSMUSG00000019564 10090 + 10:79946279-79952643 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000135005
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000135005 0.406±0.00 1.139±0.23 2.284±0.44 1.661±0.40 0.292±0.00 1.292±0.30 0.299±0.11 1.736±0.50 2.168±0.56 7.358±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0000I3 CIL_0000I3_0002 CGP 10:79916971-79955018
CIL_0004VT CIL_0004VT_0002 CGP 10:79927043-79969246

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378909 ARID3C-002 protein_coding Homo_sapiens 0 261

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