C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135022 Lrp8-012 ENSMUSG00000028613 10090 + 4:107850128-107856864 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalENSMUST00000135022
Transcript ID Adipose Adrenal
ENSMUST00000135022 0.290±0.00 2.597±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0002 VISTA 4:107302048-107904613

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306052 LRP8-001 protein_coding Homo_sapiens 0 819
ENST00000347547 LRP8-011 protein_coding Homo_sapiens 0 815
ENST00000354412 LRP8-003 protein_coding Homo_sapiens 0 819
ENST00000371454 LRP8-002 protein_coding Homo_sapiens 0 819
ENST00000459674 LRP8-006 retained_intron Homo_sapiens 0 508
ENST00000465675 LRP8-004 protein_coding Homo_sapiens 0 507
ENST00000475501 LRP8-009 protein_coding Homo_sapiens 0 813
ENST00000480045 LRP8-005 nonsense_mediated_decay Homo_sapiens 0 817
ENST00000481431 LRP8-008 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000613948 LRP8-201 protein_coding Homo_sapiens 0 798

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