C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480045 LRP8-005 ENSG00000157193 9606 - 1:53246958-53328070 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000480045
Transcript ID Colon
ENST00000480045 0.303±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143601 Lrp8-001 nonsense_mediated_decay Mus_musculus 0 3827
ENSMUST00000106732 Lrp8-002 protein_coding Mus_musculus 0 2737
ENSMUST00000030356 Lrp8-006 protein_coding Mus_musculus 0 2484
ENSMUST00000106733 Lrp8-007 protein_coding Mus_musculus 0 2073
ENSMUST00000123140 Lrp8-004 processed_transcript Mus_musculus 0 2073
ENSMUST00000106731 Lrp8-003 protein_coding Mus_musculus 0 2073
ENSMUST00000146552 Lrp8-009 processed_transcript Mus_musculus 0 1764
ENSMUST00000126573 Lrp8-008 protein_coding Mus_musculus 0 1559
ENSMUST00000135022 Lrp8-012 processed_transcript Mus_musculus 0 817
ENSMUST00000135591 Lrp8-011 retained_intron Mus_musculus 0 560
ENSMUST00000147319 Lrp8-010 processed_transcript Mus_musculus 0 350

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