C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135070 Tcirg1-004 ENSMUSG00000001750 10090 - 19:3896050-3907112 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000135070
Transcript ID Brain
ENSMUST00000135070 0.821±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005886 IDA plasma membrane
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265686 TCIRG1-001 protein_coding Homo_sapiens 0 1504
ENST00000524598 TCIRG1-011 protein_coding Homo_sapiens 0 815
ENST00000525724 TCIRG1-009 retained_intron Homo_sapiens 0 481
ENST00000527530 TCIRG1-013 retained_intron Homo_sapiens 0 339
ENST00000529364 TCIRG1-014 protein_coding Homo_sapiens 0 545
ENST00000530449 TCIRG1-006 retained_intron Homo_sapiens 0 196
ENST00000532635 TCIRG1-016 protein_coding Homo_sapiens 0 1214
ENST00000533005 TCIRG1-004 retained_intron Homo_sapiens 0 481
ENST00000534673 TCIRG1-010 nonsense_mediated_decay Homo_sapiens 0 291

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