C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: retinol dehydrogenase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135161 Rdh5-007 ENSMUSG00000025350 10090 - 10:128918420-128922888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000135161
Transcript ID Ovary Placenta
ENSMUST00000135161 13.330±0.34 6.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HO CIL_0007HO_0002 CGP 10:128913593-128924035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005788 IDA endoplasmic reticulum lumen

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257899 BLOC1S1-004 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000547076 BLOC1S1-006 protein_coding Homo_sapiens 0 499
ENST00000548556 BLOC1S1-007 protein_coding Homo_sapiens 0 401
ENST00000548925 BLOC1S1-001 protein_coding Homo_sapiens 0 499
ENST00000549147 BLOC1S1-002 protein_coding Homo_sapiens 0 324
ENST00000549424 BLOC1S1-003 protein_coding Homo_sapiens 0 226
ENST00000550412 BLOC1S1-001 protein_coding Homo_sapiens 0 324
ENST00000551926 BLOC1S1-008 protein_coding Homo_sapiens 0 324
ENST00000551946 BLOC1S1-002 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000553100 BLOC1S1-005 nonsense_mediated_decay Homo_sapiens 0 405

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