C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin beta 1 (fibronectin receptor beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135281 Itgb1-003 ENSMUSG00000025809 10090 + 8:128685870-128710660 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CP CIL_0000CP_0002 CGP 8:128359073-128733200

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302278 ITGB1-001 protein_coding Homo_sapiens 0 431
ENST00000396033 ITGB1-201 protein_coding Homo_sapiens 0 424
ENST00000414670 ITGB1-002 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000417122 ITGB1-003 protein_coding Homo_sapiens 0 320
ENST00000423113 ITGB1-202 protein_coding Homo_sapiens 0 420
ENST00000437302 ITGB1-006 protein_coding Homo_sapiens 0 424
ENST00000464001 ITGB1-008 retained_intron Homo_sapiens 0 278
ENST00000472147 ITGB1-013 protein_coding Homo_sapiens 0 215
ENST00000474568 ITGB1-004 protein_coding Homo_sapiens 0 374
ENST00000475184 ITGB1-012 protein_coding Homo_sapiens 0 418
ENST00000480226 ITGB1-009 protein_coding Homo_sapiens 0 420
ENST00000484088 ITGB1-011 processed_transcript Homo_sapiens 0 427
ENST00000488494 ITGB1-010 protein_coding Homo_sapiens 0 394
ENST00000493758 ITGB1-007 protein_coding Homo_sapiens 0 274
ENST00000528877 ITGB1-015 protein_coding Homo_sapiens 0 375
ENST00000534049 ITGB1-016 protein_coding Homo_sapiens 0 420

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