C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480226 ITGB1-009 ENSG00000150093 9606 - 10:32928150-32955663 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FV CIL_0006FV_0002 CGP 10:32900319-33336262

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090006 Itgb1-001 protein_coding Mus_musculus 0 542
ENSMUST00000135281 Itgb1-003 retained_intron Mus_musculus 0 420
ENSMUST00000124826 Itgb1-002 nonsense_mediated_decay Mus_musculus 5.99756e-43 178

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