C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476700 AGBL3-003 ENSG00000146856 9606 + 7:134986548-135012511 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000476700
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000476700 0.125±0.00 0.293±0.00 0.224±0.00 0.108±0.00 0.188±0.00 0.092±0.02 0.104±0.00 0.128±0.07 0.479±0.24 0.032±0.01 0.439±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002H0 CIL_0002H0_0001 CGP 7:134744252-135147963

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155890 Agbl3-005 retained_intron Mus_musculus 0 355
ENSMUST00000155726 Agbl3-004 retained_intron Mus_musculus 0 355
ENSMUST00000148834 Agbl3-007 nonsense_mediated_decay Mus_musculus 0 355
ENSMUST00000143474 Agbl3-003 retained_intron Mus_musculus 0 355
ENSMUST00000135304 Agbl3-002 nonsense_mediated_decay Mus_musculus 0 355
ENSMUST00000115017 Agbl3-010 protein_coding Mus_musculus 0 355
ENSMUST00000115016 Agbl3-001 protein_coding Mus_musculus 0 355
ENSMUST00000115014 Agbl3-006 protein_coding Mus_musculus 0 351
ENSMUST00000115009 Agbl3-009 protein_coding Mus_musculus 0 228
ENSMUST00000115012 Agbl3-008 protein_coding Mus_musculus 0 228

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