C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BBSome interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135402 Bbip1-201 ENSMUSG00000084957 10090 - 19:53929677-53944627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000135402
Transcript ID Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000135402 12.862±0.25 3.534±0.55 3.055±0.37 4.561±0.67 3.128±0.00 8.492±1.24 7.844±0.72 6.417±0.00 12.485±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q9 CIL_0008Q9_0002 VISTA 19:53415569-54017446
CIL_0000UM CIL_0000UM_0002 CGP 19:53677306-53929861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0034464 IEA BBSome
GO:0042384 IEA cilium assembly
GO:0042755 IMP eating behavior
GO:0097500 IMP receptor localization to nonmotile primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280154 PDCD4-001 protein_coding Homo_sapiens 0 265
ENST00000393104 PDCD4-201 protein_coding Homo_sapiens 0 265
ENST00000498367 PDCD4-010 processed_transcript Homo_sapiens 0 206

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