C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135591 Lrp8-011 ENSMUSG00000028613 10090 + 4:107846201-107848295 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000135591
Transcript ID Adrenal Ovary
ENSMUST00000135591 1.580±0.46 5.922±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0002 VISTA 4:107302048-107904613

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306052 LRP8-001 protein_coding Homo_sapiens 0 544
ENST00000371454 LRP8-002 protein_coding Homo_sapiens 0 544
ENST00000480045 LRP8-005 nonsense_mediated_decay Homo_sapiens 0 560

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