C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135802 Kdm5a-003 ENSMUSG00000030180 10090 + 6:120364124-120419473 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryENSMUST00000135802
Transcript ID Adrenal Breast Colon Kidney Lung Ovary
ENSMUST00000135802 1.053±0.00 2.898±1.84 1.229±0.20 1.218±0.00 2.611±0.00 2.672±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AW CIL_0008AW_0002 VISTA 6:119874234-120475208
CIL_00083Y CIL_00083Y_0002 VISTA 6:120053928-120655330

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382815 KDM5A-201 protein_coding Homo_sapiens 0 3435
ENST00000399788 KDM5A-001 protein_coding Homo_sapiens 0 3450
ENST00000535014 KDM5A-011 protein_coding Homo_sapiens 0 339
ENST00000536014 KDM5A-010 protein_coding Homo_sapiens 0 401
ENST00000540168 KDM5A-007 retained_intron Homo_sapiens 0 549
ENST00000541335 KDM5A-006 retained_intron Homo_sapiens 0 337
ENST00000543507 KDM5A-009 protein_coding Homo_sapiens 0 303
ENST00000544760 KDM5A-012 protein_coding Homo_sapiens 0 1628

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