C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog gene family, member T1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135947 Rhot1-005 ENSMUSG00000017686 10090 + 11:80249674-80266738 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000135947
Transcript ID Ovary
ENSMUST00000135947 2.809±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VO CIL_0000VO_0002 CGP 11:80209019-80355955

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333942 RHOT1-001 protein_coding Homo_sapiens 0 787
ENST00000354266 RHOT1-004 protein_coding Homo_sapiens 0 787
ENST00000358365 RHOT1-002 protein_coding Homo_sapiens 0 937
ENST00000394692 RHOT1-008 protein_coding Homo_sapiens 0 787
ENST00000545287 RHOT1-015 protein_coding Homo_sapiens 0 1567
ENST00000578205 RHOT1-007 nonsense_mediated_decay Homo_sapiens 0 787
ENST00000580392 RHOT1-012 protein_coding Homo_sapiens 0 547
ENST00000581031 RHOT1-005 nonsense_mediated_decay Homo_sapiens 0 1009
ENST00000581094 RHOT1-006 protein_coding Homo_sapiens 0 787
ENST00000581148 RHOT1-013 protein_coding Homo_sapiens 0 688
ENST00000581567 RHOT1-011 retained_intron Homo_sapiens 0 313
ENST00000582602 RHOT1-018 protein_coding Homo_sapiens 0 826
ENST00000583994 RHOT1-003 nonsense_mediated_decay Homo_sapiens 0 787
ENST00000584692 RHOT1-014 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000584852 RHOT1-017 protein_coding Homo_sapiens 0 237

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