C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptonemal complex central element protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136026 Syce2-001 ENSMUSG00000003824 10090 + 8:84872111-84888221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000136026
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000136026 0.490±0.31 0.075±0.01 0.470±0.04 1.286±0.92 0.273±0.17 0.416±0.24 0.078±0.03 0.409±0.18 1.817±1.46 0.386±0.16 0.131±0.05 0.589±0.30 2.865±0.45 16.565±3.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZV CIL_0007ZV_0002 VISTA 8:84428902-85032705
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230
CIL_0006LV CIL_0006LV_0002 CGP 8:84856989-84888221
CIL_00076Z CIL_00076Z_0002 CGP 8:84872111-84893921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000795 ISS synaptonemal complex
GO:0000801 IDA central element
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0007130 IC synaptonemal complex assembly

Homologs

No Homologs available.

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