C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 4 open reading frame 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393381 C4orf27-001 ENSG00000056050 9606 - 4:169729465-169757953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393381 6.230±0.00 8.685±0.00 1.042±0.00 7.101±5.70 4.211±2.52 4.215±4.14 2.474±2.12 3.906±3.01 2.875±1.52 1.686±1.10 1.871±1.46 7.048±3.65 8.316±3.48 11.701±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037190 2700029M09Rik-001 protein_coding Mus_musculus 0 1341
ENSMUST00000149267 2700029M09Rik-002 nonsense_mediated_decay Mus_musculus 0 841
ENSMUST00000134886 2700029M09Rik-003 retained_intron Mus_musculus 0 619
ENSMUST00000146863 2700029M09Rik-005 nonsense_mediated_decay Mus_musculus 0 394
ENSMUST00000136098 2700029M09Rik-004 nonsense_mediated_decay Mus_musculus 0 375

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