C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | polybromo 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000136237  |
Pbrm1-005 |
ENSMUSG00000042323 |
10090 | + |
14:31025507-31118966  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007WP | CIL_0007WP_0002 | VISTA | 14:30932335-31535522 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000776 | IDA | kinetochore |
| GO:0001890 | IMP | placenta development |
| GO:0003682 | IDA | chromatin binding |
| GO:0005634 | IC | nucleus |
| GO:0007507 | IMP | heart development |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000296302
|
PBRM1-008 | protein_coding | Homo_sapiens | 0 | 6072 |
|
ENST00000337303
|
PBRM1-009 | protein_coding | Homo_sapiens | 0 | 6078 |
|
ENST00000356770
|
PBRM1-001 | protein_coding | Homo_sapiens | 0 | 5581 |
|
ENST00000394830
|
PBRM1-002 | protein_coding | Homo_sapiens | 0 | 4180 |
|
ENST00000409057
|
PBRM1-003 | protein_coding | Homo_sapiens | 0 | 7057 |
|
ENST00000409114
|
PBRM1-006 | protein_coding | Homo_sapiens | 0 | 3869 |
|
ENST00000409767
|
PBRM1-005 | protein_coding | Homo_sapiens | 0 | 3873 |
|
ENST00000410007
|
PBRM1-007 | protein_coding | Homo_sapiens | 0 | 4174 |
|
ENST00000412587
|
PBRM1-020 | nonsense_mediated_decay | Homo_sapiens | 0 | 3633 |
|
ENST00000420148
|
PBRM1-013 | protein_coding | Homo_sapiens | 0 | 717 |
|
ENST00000423351
|
PBRM1-019 | protein_coding | Homo_sapiens | 0 | 6235 |
|
ENST00000424867
|
PBRM1-014 | protein_coding | Homo_sapiens | 5e-28 | 128 |
|
ENST00000431678
|
PBRM1-018 | protein_coding | Homo_sapiens | 0 | 1051 |
|
ENST00000439181
|
PBRM1-015 | protein_coding | Homo_sapiens | 0 | 202 |
|
ENST00000446103
|
PBRM1-004 | protein_coding | Homo_sapiens | 0 | 2566 |
|
ENST00000449505
|
PBRM1-016 | protein_coding | Homo_sapiens | 0 | 564 |
|
ENST00000450271
|
PBRM1-017 | protein_coding | Homo_sapiens | 0 | 411 |
|
ENST00000458294
|
PBRM1-012 | protein_coding | Homo_sapiens | 0 | 200 |
|
ENST00000462207
|
PBRM1-010 | retained_intron | Homo_sapiens | 0 | 1360 |
|
ENST00000480064
|
PBRM1-011 | retained_intron | Homo_sapiens | 0 | 924 |
