C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoplasmic polyadenylation element binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136286 Cpeb3-007 ENSMUSG00000039652 10090 - 19:37021879-37207462 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverLungPlacentaENSMUST00000136286
Transcript ID Adipose Breast Colon Kidney Liver Lung Placenta
ENSMUST00000136286 0.550±0.06 0.890±0.00 0.703±0.18 1.050±0.00 0.988±0.43 1.127±0.68 0.194±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018R CIL_00018R_0002 CGP 19:36926079-37208601
CIL_00018Q CIL_00018Q_0002 CGP 19:37021291-37222139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IDA RNA binding
GO:0017148 IMP negative regulation of translation
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115341 protein_coding Danio_rerio 0 309
ENSDART00000084354 cpeb3-001 protein_coding Danio_rerio 0.000000001 71
ENST00000265997 CPEB3-002 protein_coding Homo_sapiens 0 4405
ENST00000412050 CPEB3-001 protein_coding Homo_sapiens 0 2567
ENST00000614585 CPEB3-201 protein_coding Homo_sapiens 0 4229

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