C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fas (TNFRSF6) binding factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136318 Fbf1-002 ENSMUSG00000020776 10090 - 11:116142285-116167780 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungMuscleOvaryPlacentaENSMUST00000136318
Transcript ID Breast Colon Liver Lung Muscle Ovary Placenta
ENSMUST00000136318 1.138±0.04 0.777±0.06 0.532±0.24 1.915±0.00 0.614±0.00 2.818±0.44 1.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00078W CIL_00078W_0002 CGP 11:116142285-116199045

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319129 FBF1-201 protein_coding Homo_sapiens 0 1701
ENST00000389570 FBF1-202 protein_coding Homo_sapiens 0 948
ENST00000585990 FBF1-002 retained_intron Homo_sapiens 0 822
ENST00000586717 FBF1-001 protein_coding Homo_sapiens 0 1668
ENST00000588283 FBF1-007 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000590264 FBF1-009 protein_coding Homo_sapiens 1e-19 100
ENST00000592193 FBF1-003 protein_coding Homo_sapiens 0 1688
ENST00000593076 FBF1-006 retained_intron Homo_sapiens 0 219
ENST00000593156 RP11-552F3.12-001 retained_intron Homo_sapiens 0 909

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