C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fas (TNFRSF6) binding factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586717 FBF1-001 ENSG00000188878 9606 - 17:75909574-75941038 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000586717
Transcript ID Ovary Testis
ENST00000586717 3.272±0.00 5.316±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_00078W CIL_00078W_0001 CGP 17:75909574-75979363

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000922 IDA spindle pole
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005814 IDA centriole
GO:0042384 IMP cilium assembly
GO:0043296 IDA apical junction complex
GO:0043297 IMP apical junction assembly
GO:0044237 IEA cellular metabolic process
GO:0045095 IDA keratin filament
GO:0090162 IMP establishment of epithelial cell polarity
GO:0097539 IDA ciliary transition fiber

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106435 Fbf1-201 protein_coding Mus_musculus 0 1705
ENSMUST00000103031 Fbf1-001 protein_coding Mus_musculus 0 1705
ENSMUST00000136318 Fbf1-002 processed_transcript Mus_musculus 0 1668
ENSMUST00000125980 Fbf1-004 processed_transcript Mus_musculus 0 915
ENSMUST00000126861 Fbf1-005 processed_transcript Mus_musculus 0 385

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