C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-raf murine sarcoma 3611 viral oncogene homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136451 Araf-006 ENSMUSG00000001127 10090 + X:20797814-20860497 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungOvaryPlacentaENSMUST00000136451
Transcript ID Adipose Breast Colon Lung Ovary Placenta
ENSMUST00000136451 11.672±1.45 11.276±1.68 14.218±0.32 8.994±0.00 11.336±1.33 4.014±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GC CIL_0005GC_0002 CGP X:20797814-20921004

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005057 IEA receptor signaling protein activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006468 IEA protein phosphorylation
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290277 ARAF-201 protein_coding Homo_sapiens 0 1345
ENST00000377039 ARAF-005 protein_coding Homo_sapiens 0 798
ENST00000377045 ARAF-001 protein_coding Homo_sapiens 0 1386
ENST00000469505 ARAF-002 processed_transcript Homo_sapiens 0 339
ENST00000470206 ARAF-003 processed_transcript Homo_sapiens 0 377
ENST00000489496 ARAF-004 processed_transcript Homo_sapiens 0 529

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