C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeobox A11, opposite strand
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137729 Hoxa11os-005 ENSMUSG00000086427 10090 + 6:52246221-52249380 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonLiverLungOvaryPlacentaTestisENSMUST00000137729
Transcript ID Adipose Bladder Brain Colon Liver Lung Ovary Placenta Testis
ENSMUST00000137729 2.017±0.00 28.541±4.86 0.069±0.04 67.636±5.90 0.076±0.02 0.283±0.00 2.411±0.23 3.407±0.00 0.336±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0003 UCNEbase 6:51462736-52602127
CIL_0008QL CIL_0008QL_0002 VISTA 6:51878169-52478777
CIL_000911 CIL_000911_0002 VISTA 6:51970433-52571615
CIL_000811 CIL_000811_0002 VISTA 6:52019082-52620287
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003P7 CIL_0003P7_0002 CGP 6:52231197-52245810
CIL_0003P8 CIL_0003P8_0002 CGP 6:52242106-52260880

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

No Homologs available.

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