C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137788 Fbxl13-002 ENSMUSG00000048520 10090 - 5:21490200-21645587 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000137788
Transcript ID Liver
ENSMUST00000137788 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0005CF CIL_0005CF_0002 CGP 5:21424958-21645605
CIL_0005CK CIL_0005CK_0002 CGP 5:21483847-21645605

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249377 LRRC17-001 protein_coding Homo_sapiens 2e-17 95
ENST00000313221 FBXL13-001 protein_coding Homo_sapiens 0 1040
ENST00000339431 LRRC17-002 protein_coding Homo_sapiens 2e-17 95
ENST00000379305 FBXL13-003 protein_coding Homo_sapiens 0 944
ENST00000379308 FBXL13-201 protein_coding Homo_sapiens 0 1181
ENST00000436908 FBXL13-006 protein_coding Homo_sapiens 0 1040
ENST00000448002 FBXL13-002 nonsense_mediated_decay Homo_sapiens 0 1181
ENST00000455112 FBXL13-005 protein_coding Homo_sapiens 0 976
ENST00000456695 FBXL13-007 protein_coding Homo_sapiens 0 457
ENST00000477915 FBXL13-010 processed_transcript Homo_sapiens 0 464
ENST00000498487 LRRC17-003 processed_transcript Homo_sapiens 6e-18 95

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