C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137896 Slc12a6-006 ENSMUSG00000027130 10090 + 2:112356195-112363163 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungOvaryTestisENSMUST00000137896
Transcript ID Bladder Brain Breast Liver Lung Ovary Testis
ENSMUST00000137896 12.178±0.44 5.706±1.09 9.927±0.26 3.268±0.50 7.025±0.42 4.401±1.49 0.888±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZB CIL_0000ZB_0002 CGP 2:112265825-112406319

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290209 SLC12A6-001 protein_coding Homo_sapiens 0 673
ENST00000354181 SLC12A6-003 protein_coding Homo_sapiens 0 673
ENST00000397702 SLC12A6-008 protein_coding Homo_sapiens 0 673
ENST00000397707 SLC12A6-002 protein_coding Homo_sapiens 0 673
ENST00000458406 SLC12A6-006 protein_coding Homo_sapiens 0 673
ENST00000558589 SLC12A6-004 protein_coding Homo_sapiens 0 673
ENST00000558667 SLC12A6-009 protein_coding Homo_sapiens 0 673
ENST00000559076 SLC12A6-016 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000559441 SLC12A6-019 retained_intron Homo_sapiens 3e-21 106
ENST00000559523 SLC12A6-005 nonsense_mediated_decay Homo_sapiens 0 675
ENST00000559664 SLC12A6-007 nonsense_mediated_decay Homo_sapiens 0 673
ENST00000560164 SLC12A6-017 protein_coding Homo_sapiens 0 673
ENST00000560611 SLC12A6-010 protein_coding Homo_sapiens 0 673
ENST00000561080 SLC12A6-020 nonsense_mediated_decay Homo_sapiens 0 675

Loading