C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12 (potassium/chloride transporter), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000290209 SLC12A6-001 ENSG00000140199 9606 - 15:34229996-34318779 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000290209
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000290209 3.856±0.00 4.523±0.00 1.622±0.43 2.386±1.03 0.716±0.00 1.419±0.94 0.742±0.00 1.500±0.19 0.691±0.00 2.468±0.55 2.151±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 NAS angiogenesis
GO:0005215 IEA transporter activity
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006811 IDA:IEA ion transport
GO:0006813 IEA potassium ion transport
GO:0006821 IDA chloride transport
GO:0010107 IDA potassium ion import
GO:0015079 IDA potassium ion transmembrane transporter activity
GO:0015377 IEA cation:chloride symporter activity
GO:0015379 IDA potassium:chloride symporter activity
GO:0016020 IEA membrane
GO:0016021 NAS:IEA integral component of membrane
GO:0016323 ISS basolateral plasma membrane
GO:0019901 IPI protein kinase binding
GO:0035826 IMP rubidium ion transport
GO:0035827 IMP rubidium ion transmembrane transporter activity
GO:0055085 IEA:TAS transmembrane transport
GO:0071476 IMP cellular hypotonic response
GO:0071477 IDA cellular hypotonic salinity response
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053666 Slc12a6-004 protein_coding Mus_musculus 0 4351
ENSMUST00000028549 Slc12a6-001 protein_coding Mus_musculus 0 4244
ENSMUST00000110991 Slc12a6-003 protein_coding Mus_musculus 0 4115
ENSMUST00000141047 Gm21985-001 nonsense_mediated_decay Mus_musculus 0 4069
ENSMUST00000110987 Slc12a6-005 protein_coding Mus_musculus 0 3350
ENSMUST00000137896 Slc12a6-006 retained_intron Mus_musculus 0 673
ENSMUST00000156470 Slc12a6-009 processed_transcript Mus_musculus 0 641
ENSMUST00000133840 Slc12a6-008 processed_transcript Mus_musculus 0 582
ENSDART00000057258 slc12a5a-201 protein_coding Danio_rerio 0 412
ENSDART00000157129 slc12a5a-001 protein_coding Danio_rerio 0 412
ENSMUST00000132752 Slc12a6-007 processed_transcript Mus_musculus 0 281

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