C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12 (potassium/chloride transporter), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559664 SLC12A6-007 ENSG00000140199 9606 - 15:34233259-34337786 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000559664
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000559664 2.640±0.00 2.774±0.00 1.779±0.00 0.991±0.00 0.803±0.00 0.638±0.00 1.904±0.00 1.685±0.00 1.460±0.00 15.596±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0015377 IEA cation:chloride symporter activity
GO:0015379 IEA potassium:chloride symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110991 Slc12a6-003 protein_coding Mus_musculus 0 3842
ENSMUST00000028549 Slc12a6-001 protein_coding Mus_musculus 0 3504
ENSMUST00000053666 Slc12a6-004 protein_coding Mus_musculus 0 3160
ENSMUST00000110987 Slc12a6-005 protein_coding Mus_musculus 0 3094
ENSMUST00000141047 Gm21985-001 nonsense_mediated_decay Mus_musculus 0 3094
ENSMUST00000137896 Slc12a6-006 retained_intron Mus_musculus 0 673
ENSMUST00000133840 Slc12a6-008 processed_transcript Mus_musculus 0 582
ENSMUST00000156470 Slc12a6-009 processed_transcript Mus_musculus 0 315
ENSMUST00000132752 Slc12a6-007 processed_transcript Mus_musculus 0 281
ENSDART00000057258 slc12a5a-201 protein_coding Danio_rerio 3.9937e-43 182
ENSDART00000157129 slc12a5a-001 protein_coding Danio_rerio 3.9937e-43 182

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