C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: malate dehydrogenase 2, NAD (mitochondrial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138101 Mdh2-002 ENSMUSG00000019179 10090 + 5:135778662-135790398 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyMuscleOvaryPlacentaTestisENSMUST00000138101
Transcript ID Brain Breast Kidney Muscle Ovary Placenta Testis
ENSMUST00000138101 99.158±0.00 42.704±0.00 54.142±0.00 85.092±16.96 123.969±22.52 193.761±111.46 7.743±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NU CIL_0006NU_0002 CGP 5:135747220-135790398
CIL_0006NT CIL_0006NT_0002 CGP 5:135778480-135874772

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006108 ISA malate metabolic process
GO:0016615 ISA malate dehydrogenase activity
GO:0030060 IDA L-malate dehydrogenase activity
GO:0055114 ISA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315758 MDH2-001 protein_coding Homo_sapiens 0 791
ENST00000424167 MDH2-007 retained_intron Homo_sapiens 0 488
ENST00000443006 MDH2-004 protein_coding Homo_sapiens 0 904

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