C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spinster homolog 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138141 Spns1-004 ENSMUSG00000030741 10090 - 7:126370067-126377411 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverTestisENSMUST00000138141
Transcript ID Liver Testis
ENSMUST00000138141 2.506±0.00 1.401±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AT CIL_0005AT_0002 CGP 7:126370060-126396737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311008 SPNS1-001 protein_coding Homo_sapiens 0 1267
ENST00000323081 SPNS1-002 protein_coding Homo_sapiens 0 1267
ENST00000334536 SPNS1-006 protein_coding Homo_sapiens 0 760
ENST00000352260 SPNS1-005 protein_coding Homo_sapiens 0 760
ENST00000564476 SPNS1-012 protein_coding Homo_sapiens 0 460
ENST00000565975 SPNS1-003 protein_coding Homo_sapiens 0 1267
ENST00000566059 SPNS1-007 protein_coding Homo_sapiens 0 867
ENST00000567771 SPNS1-008 protein_coding Homo_sapiens 0 545
ENST00000568388 SPNS1-009 protein_coding Homo_sapiens 0 472
ENST00000568829 SPNS1-011 protein_coding Homo_sapiens 0 531
ENST00000568900 SPNS1-004 retained_intron Homo_sapiens 0 545

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