C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMC hinge domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138193 Smchd1-002 ENSMUSG00000024054 10090 - 17:71344489-71356496 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000138193
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000138193 5.884±0.00 4.912±0.62 6.392±0.13 0.992±0.19 9.015±0.00 13.189±0.27 1.426±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320876 SMCHD1-001 protein_coding Homo_sapiens 0 416
ENST00000577880 SMCHD1-006 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000584897 SMCHD1-007 nonsense_mediated_decay Homo_sapiens 0 416

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