C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC13 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138204 Sec13-003 ENSMUSG00000030298 10090 - 6:113730430-113735070 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064V CIL_00064V_0002 CGP 6:113716119-113740743
CIL_00064R CIL_00064R_0002 CGP 6:113728067-114042613

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337354 SEC13-002 protein_coding Homo_sapiens 8.40779e-45 185
ENST00000350697 SEC13-001 protein_coding Homo_sapiens 8.40779e-45 185
ENST00000383801 SEC13-003 protein_coding Homo_sapiens 8.40779e-45 185
ENST00000397109 SEC13-004 protein_coding Homo_sapiens 8.40779e-45 185
ENST00000397117 SEC13-005 protein_coding Homo_sapiens 9.80909e-45 185
ENST00000429534 SEC13P1-001 processed_pseudogene Homo_sapiens 1e-32 145
ENST00000476597 SEC13-018 retained_intron Homo_sapiens 0 191
ENST00000477547 SEC13-014 retained_intron Homo_sapiens 8.40779e-45 185
ENST00000479868 SEC13-015 retained_intron Homo_sapiens 9.80909e-45 185
ENST00000481581 GLB1-019 processed_transcript Homo_sapiens 7e-25 117
ENST00000490283 SEC13-017 retained_intron Homo_sapiens 0 202
ENST00000497796 GLB1-016 processed_transcript Homo_sapiens 7e-24 115

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