C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00064V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157017-ENSG00000157020 CGP 9606 3:10285675-10321178
GeneTranscriptPositionBiotype
ENSG00000157020 (SEC13)
SEC13 homolog (S. cerevisiae)
ENST00000337354 (SEC13-002) 10300931-10321082 protein_coding
ENST00000350697 (SEC13-001) 10300931-10321178 protein_coding
ENST00000383801 (SEC13-003) 10300961-10321084 protein_coding
ENST00000397099 (SEC13-009) 10315142-10321086 retained_intron
ENST00000397101 (SEC13-008) 10314953-10321112 retained_intron
ENST00000397102 (SEC13-010) 10313080-10321112 retained_intron
ENST00000397105 (SEC13-011) 10311573-10321093 retained_intron
ENST00000397109 (SEC13-004) 10300931-10321041 protein_coding
ENST00000397117 (SEC13-005) 10300950-10321061 protein_coding
ENST00000428626 (SEC13-007) 10318068-10321056 protein_coding
ENST00000431352 (SEC13-012) 10312646-10321060 protein_coding
ENST00000432213 (SEC13-019) 10319206-10321093 protein_coding
ENST00000445064 (SEC13-006) 10318070-10321058 protein_coding
ENST00000476597 (SEC13-018) 10304035-10305910 retained_intron
ENST00000477547 (SEC13-014) 10303551-10318080 retained_intron
ENST00000479868 (SEC13-015) 10300933-10313971 retained_intron
ENST00000482647 (SEC13-016) 10311573-10312834 retained_intron
ENST00000490283 (SEC13-017) 10304111-10305710 retained_intron
ENST00000492602 (SEC13-013) 10293131-10305072 processed_transcript
CIL_00064V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000064177-ENSMUSG00000030298 CGP 10090 6:113716119-113740743
GeneTranscriptPositionBiotype
ENSMUSG00000030298 (Sec13)
SEC13 homolog (S. cerevisiae)
ENSMUST00000032440 (Sec13-001) 113728067-113740743 protein_coding
ENSMUST00000138204 (Sec13-003) 113730430-113735070 retained_intron
ENSMUST00000145979 (Sec13-002) 113730596-113735070 processed_transcript
ENSMUSG00000064177 (Ghrl)
ghrelin
ENSMUST00000064993 (Ghrl-201) 113716119-113719880 protein_coding
ENSMUSG00000097994 (Gm26982)
predicted gene, 26982
ENSMUST00000182250 (Gm26982-001) 113714971-113716121 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064V_0001ENSG00000157020ENST00000337354ENST00000350697ENST00000383801ENST00000397099ENST00000397101ENST00000397102ENST00000397105ENST00000397109ENST00000397117ENST00000428626ENST00000431352ENST00000432213ENST00000445064ENST00000476597ENST00000477547ENST00000479868ENST00000482647ENST00000490283ENST00000492602CIL_00064V_0002ENSMUSG00000030298ENSMUST00000032440ENSMUST00000138204ENSMUST00000145979ENSMUSG00000064177ENSMUST00000064993ENSMUSG00000097994ENSMUST00000182250
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064V_0001ENSG00000157020ENST00000337354ENST00000350697ENST00000383801ENST00000397102ENST00000397109ENST00000397117ENST00000476597ENST00000479868CIL_00064V_0002ENSMUSG00000030298ENSMUST00000032440ENSMUSG00000064177ENSMUST00000064993ENSMUSG00000097994ENSMUST00000182250
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157020 ENST00000337354 N/A N/A N/A 6.200±0.00 N/A 8.218±0.00 N/A 14.080±0.00 3.746±0.00 N/A N/A 25.451±0.00 45.425±12.05 N/A
ENST00000350697 32.663±0.00 47.985±0.00 5.230±0.00 16.470±9.85 29.054±9.08 28.511±0.00 11.536±7.75 55.357±0.00 25.134±18.84 30.346±23.70 47.627±33.23 28.442±19.85 38.679±1.80 33.422±11.37
ENST00000383801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.310±0.00 N/A N/A
ENST00000397099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397102 N/A N/A 12.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397109 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.526±0.00 N/A N/A N/A N/A
ENST00000397117 N/A N/A N/A N/A N/A N/A 1.689±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000428626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.463±0.00 46.714±0.00 30.611±0.00
ENST00000477547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479868 N/A N/A 1.838±0.00 N/A N/A 4.146±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030298 ENSMUST00000032440 87.304±4.25 40.764±6.47 69.810±17.46 55.192±32.12 49.882±7.29 68.023±11.97 36.455±2.62 52.509±3.46 56.309±20.36 49.680±6.89 32.491±5.66 78.581±15.14 69.533±30.56 47.493±15.29
ENSMUST00000138204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064177 ENSMUST00000064993 N/A 0.379±0.08 N/A N/A N/A 0.527±0.22 N/A N/A N/A N/A N/A 0.914±0.46 N/A 5.732±0.00
ENSMUSG00000097994 ENSMUST00000182250 0.943±0.16 0.537±0.18 2.227±0.00 1.856±0.00 0.904±0.37 N/A 0.643±0.19 1.465±0.77 0.924±0.42 1.271±0.42 0.438±0.05 1.435±0.59 1.508±0.50 N/A

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