C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC13 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030298 Sec13 10090 - 6:113728067-113740743 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032440 Sec13-001 113728067-113740743 protein_coding
  ENSMUST00000138204 Sec13-003 113730430-113735070 retained_intron
  ENSMUST00000145979 Sec13-002 113730596-113735070 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032440
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032440 87.304±4.25 40.764±6.47 69.810±17.46 55.192±32.12 49.882±7.29 68.023±11.97 36.455±2.62 52.509±3.46 56.309±20.36 49.680±6.89 32.491±5.66 78.581±15.14 69.533±30.56 47.493±15.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064V CIL_00064V_0002 CGP 6:113716119-113740743
CIL_00064R CIL_00064R_0002 CGP 6:113728067-114042613

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005635 IEA nuclear envelope
GO:0005783 ISO endoplasmic reticulum
GO:0006888 ISA ER to Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0031080 ISS nuclear pore outer ring
GO:0031410 IEA cytoplasmic vesicle
GO:0051028 IEA mRNA transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054807 sec13 SEC13 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000157020 SEC13 SEC13 homolog (S. cerevisiae) protein_coding Homo_sapiens

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