C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00064R_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000157020-ENSG00000157087 | CGP | 9606 | 3:10293131-10708031  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000157020  (SEC13)SEC13 homolog (S. cerevisiae) |
ENST00000337354 (SEC13-002)
|
10300931-10321082 | protein_coding | |
|
ENST00000350697 (SEC13-001)
|
10300931-10321178 | protein_coding | ||
|
ENST00000383801 (SEC13-003)
|
10300961-10321084 | protein_coding | ||
|
ENST00000397099 (SEC13-009)
|
10315142-10321086 | retained_intron | ||
|
ENST00000397101 (SEC13-008)
|
10314953-10321112 | retained_intron | ||
|
ENST00000397102 (SEC13-010)
|
10313080-10321112 | retained_intron | ||
|
ENST00000397105 (SEC13-011)
|
10311573-10321093 | retained_intron | ||
|
ENST00000397109 (SEC13-004)
|
10300931-10321041 | protein_coding | ||
|
ENST00000397117 (SEC13-005)
|
10300950-10321061 | protein_coding | ||
|
ENST00000428626 (SEC13-007)
|
10318068-10321056 | protein_coding | ||
|
ENST00000431352 (SEC13-012)
|
10312646-10321060 | protein_coding | ||
|
ENST00000432213 (SEC13-019)
|
10319206-10321093 | protein_coding | ||
|
ENST00000445064 (SEC13-006)
|
10318070-10321058 | protein_coding | ||
|
ENST00000476597 (SEC13-018)
|
10304035-10305910 | retained_intron | ||
|
ENST00000477547 (SEC13-014)
|
10303551-10318080 | retained_intron | ||
|
ENST00000479868 (SEC13-015)
|
10300933-10313971 | retained_intron | ||
|
ENST00000482647 (SEC13-016)
|
10311573-10312834 | retained_intron | ||
|
ENST00000490283 (SEC13-017)
|
10304111-10305710 | retained_intron | ||
|
ENST00000492602 (SEC13-013)
|
10293131-10305072 | processed_transcript | ||
|
ENSG00000157087 (ATP2B2) ATPase, Ca++ transporting, plasma membrane 2 |
ENST00000352432 (ATP2B2-001)
|
10324023-10449613 | protein_coding | |
|
ENST00000360273 (ATP2B2-201)
|
10324023-10505584 | protein_coding | ||
|
ENST00000383800 (ATP2B2-002)
|
10324023-10505657 | protein_coding | ||
|
ENST00000397077 (ATP2B2-005)
|
10324023-10708031 | protein_coding | ||
|
ENST00000452124 (ATP2B2-003)
|
10328098-10410675 | protein_coding | ||
|
ENST00000460129 (ATP2B2-004)
|
10324023-10534133 | nonsense_mediated_decay | ||
|
ENST00000467702 (ATP2B2-006)
|
10328446-10336300 | processed_transcript | ||
|
ENST00000468426 (ATP2B2-009)
|
10328811-10332324 | processed_transcript | ||
|
ENST00000480680 (ATP2B2-008)
|
10387884-10505584 | retained_intron | ||
|
ENSG00000224771 (ATP2B2-IT2) ATP2B2 intronic transcript 2 (non-protein coding) |
ENST00000419591 (ATP2B2-IT2-001)
|
10626021-10626807 | sense_intronic | |
|
ENSG00000236999 (ATP2B2-IT1) ATP2B2 intronic transcript 1 (non-protein coding) |
ENST00000440152 (ATP2B2-IT1-001)
|
10566255-10570375 | sense_intronic | |
| CIL_00064R_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000030298-ENSMUSG00000030302 | CGP | 10090 | 6:113728067-114042613 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000030298 (Sec13) SEC13 homolog (S. cerevisiae) |
ENSMUST00000032440 (Sec13-001)
|
113728067-113740743 | protein_coding | |
|
ENSMUST00000138204 (Sec13-003)
|
113730430-113735070 | retained_intron | ||
|
ENSMUST00000145979 (Sec13-002)
|
113730596-113735070 | processed_transcript | ||
|
ENSMUSG00000030302 (Atp2b2) ATPase, Ca++ transporting, plasma membrane 2 |
ENSMUST00000089003 (Atp2b2-004)
|
113745669-113891539 | protein_coding | |
|
ENSMUST00000101044 (Atp2b2-003)
|
113748294-113934681 | protein_coding | ||
|
ENSMUST00000101045 (Atp2b2-001)
|
113745675-114042026 | protein_coding | ||
|
ENSMUST00000135199 (Atp2b2-005)
|
113803338-113891370 | retained_intron | ||
|
ENSMUST00000144507 (Atp2b2-006)
|
113842331-113910582 | processed_transcript | ||
|
ENSMUST00000152831 (Atp2b2-002)
|
113745670-114042015 | nonsense_mediated_decay | ||
|
ENSMUST00000154738 (Atp2b2-007)
|
113842549-114042613 | processed_transcript | ||
|
ENSMUSG00000087053 (Gm15082) predicted gene 15082 |
ENSMUST00000147045 (Gm15082-001)
|
113937739-113940206 | lincRNA | |
|
ENSMUSG00000087083 (Gm15083) predicted gene 15083 |
ENSMUST00000138670 (Gm15083-001)
|
114004789-114052108 | lincRNA | |
Expression Patterns
|
