C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361400 ST3GAL3-002 ENSG00000126091 9606 + 1:43707547-43931159 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000361400
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000361400 6.308±0.00 4.487±0.00 1.938±0.00 1.635±0.00 2.089±0.00 1.108±0.00 1.405±0.00 2.041±1.01 4.545±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B8 CIL_0005B8_0002 CGP 1:43650158-43931165
CIL_0005B9 CIL_0005B9_0002 CGP 1:43705824-43937241

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005576 IEA extracellular region
GO:0005975 TAS carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0008118 IEA N-acetyllactosaminide alpha-2,3-sialyltransferase activity
GO:0008373 IEA sialyltransferase activity
GO:0016266 TAS O-glycan processing
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0030173 IEA integral component of Golgi membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097912 St3gal3-003 protein_coding Mus_musculus 0 2021
ENSMUST00000106410 St3gal3-002 protein_coding Mus_musculus 0 1748
ENSMUST00000030263 St3gal3-001 protein_coding Mus_musculus 0 1748
ENSMUST00000138274 St3gal3-004 protein_coding Mus_musculus 0 819
ENSMUST00000126336 St3gal3-005 protein_coding Mus_musculus 0 719

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