C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel, subfamily T, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138568 Kcnt1-005 ENSMUSG00000058740 10090 + 2:25894343-25916590 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverMusclePlacentaTestisENSMUST00000138568
Transcript ID Adrenal Brain Colon Liver Muscle Placenta Testis
ENSMUST00000138568 0.500±0.05 2.417±0.08 0.123±0.00 0.010±0.00 0.042±0.01 0.036±0.00 0.437±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EW CIL_0001EW_0002 CGP 2:25842995-25918273
CIL_0001EV CIL_0001EV_0002 CGP 2:25863795-25983282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113556 kcnt1-201 protein_coding Danio_rerio 3e-23 115
ENSDART00000150936 kcnt1-001 protein_coding Danio_rerio 3e-23 115
ENST00000263604 KCNT1-201 protein_coding Homo_sapiens 0 1140
ENST00000371757 KCNT1-002 protein_coding Homo_sapiens 0 1140
ENST00000460750 KCNT1-003 nonsense_mediated_decay Homo_sapiens 0 1140
ENST00000486577 KCNT1-007 protein_coding Homo_sapiens 0 1136
ENST00000487664 KCNT1-001 protein_coding Homo_sapiens 0 1140
ENST00000488444 KCNT1-005 protein_coding Homo_sapiens 0 1140
ENST00000490355 KCNT1-006 protein_coding Homo_sapiens 0 1136
ENST00000490363 KCNT1-009 retained_intron Homo_sapiens 0 1140
ENST00000491806 KCNT1-004 protein_coding Homo_sapiens 0 1140

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