C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel, subfamily T, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371757 KCNT1-002 ENSG00000107147 9606 + 9:135702192-135793103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartMuscleOvaryPlacentaTestisENST00000371757
Transcript ID Breast Colon Heart Muscle Ovary Placenta Testis
ENST00000371757 0.254±0.00 0.010±0.00 0.133±0.00 1.129±0.03 0.619±0.40 0.193±0.06 0.173±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EW CIL_0001EW_0001 CGP 9:135693407-135793150
CIL_0001EV CIL_0001EV_0001 CGP 9:135702185-135907228

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005249 IBA voltage-gated potassium channel activity
GO:0006813 IEA potassium ion transport
GO:0008076 IBA voltage-gated potassium channel complex
GO:0015269 IBA:IEA calcium-activated potassium channel activity
GO:0016020 IEA membrane
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114176 Kcnt1-004 protein_coding Mus_musculus 0 4076
ENSMUST00000171268 Kcnt1-201 protein_coding Mus_musculus 0 3868
ENSMUST00000037580 Kcnt1-001 protein_coding Mus_musculus 0 3868
ENSMUST00000114172 Kcnt1-003 protein_coding Mus_musculus 0 3829
ENSDART00000109046 KCNT1 (1 of 3)-201 protein_coding Danio_rerio 0 1663
ENSMUST00000153001 Kcnt1-010 processed_transcript Mus_musculus 0 1190
ENSMUST00000138568 Kcnt1-005 processed_transcript Mus_musculus 0 1140
ENSMUST00000114170 Kcnt1-002 protein_coding Mus_musculus 0 957
ENSMUST00000131529 Kcnt1-008 processed_transcript Mus_musculus 0 715
ENSMUST00000145544 Kcnt1-006 processed_transcript Mus_musculus 0 553
ENSMUST00000150788 Kcnt1-007 processed_transcript Mus_musculus 0 346
ENSMUST00000128502 Kcnt1-009 processed_transcript Mus_musculus 0 219
ENSDART00000110065 CR392045.1-201 protein_coding Danio_rerio 8e-30 137

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