C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138643 Cdh22-002 ENSMUSG00000053166 10090 - 2:165112327-165181459 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000138643
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000138643 0.014±0.00 0.574±0.00 0.115±0.02 6.570±6.61 0.052±0.01 0.062±0.03 0.170±0.10 0.024±0.01 0.003±0.00 0.168±0.00 0.085±0.05 0.616±0.30 0.051±0.03 0.082±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BF CIL_0007BF_0002 CGP 2:165111507-165287869

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372262 CDH22-001 protein_coding Homo_sapiens 0 1312
ENST00000537909 CDH22-201 protein_coding Homo_sapiens 0 1312

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