C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: autophagy related 9B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138716 Atg9b-003 ENSMUSG00000038295 10090 - 5:24384620-24390635 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaENSMUST00000138716
Transcript ID Liver Placenta
ENSMUST00000138716 2.464±0.00 1.234±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0004OG CIL_0004OG_0002 CGP 5:24319589-24384474
CIL_0004OH CIL_0004OH_0002 CGP 5:24364810-24392143
CIL_0004O6 CIL_0004O6_0002 CGP 5:24384181-24410054

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000466157 ATG9B-011 processed_transcript Homo_sapiens 0 381
ENST00000469530 ATG9B-007 protein_coding Homo_sapiens 0 1037
ENST00000473134 ATG9B-008 retained_intron Homo_sapiens 0 381
ENST00000473409 ATG9B-005 processed_transcript Homo_sapiens 0 381
ENST00000605952 ATG9B-001 nonsense_mediated_decay Homo_sapiens 0 1037
ENST00000611177 ATG9B-003 processed_transcript Homo_sapiens 0 1051
ENST00000617967 ATG9B-002 processed_transcript Homo_sapiens 0 1426

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