C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin related protein 2/3 complex, subunit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138722 Arpc4-003 ENSMUSG00000079426 10090 + 6:113378570-113389015 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000138722
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000138722 32.723±8.50 24.971±0.53 17.451±2.70 24.951±2.21 8.212±1.36 20.447±0.33 8.283±0.00 6.765±2.28 41.559±17.39 61.892±40.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WP CIL_0002WP_0002 CGP 6:113366025-113390448
CIL_0005IQ CIL_0005IQ_0002 CGP 6:113378113-113414583

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000081062 arpc4l-201 protein_coding Danio_rerio 0 448
ENSDART00000123665 arpc4l-001 protein_coding Danio_rerio 0 448
ENST00000397256 ARPC4-TTLL3-001 protein_coding Homo_sapiens 0 479
ENST00000397261 ARPC4-001 protein_coding Homo_sapiens 0 893
ENST00000417500 ARPC4-003 nonsense_mediated_decay Homo_sapiens 0 704
ENST00000418163 ARPC4-TTLL3-003 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000424442 ARPC4-TTLL3-005 nonsense_mediated_decay Homo_sapiens 0 713
ENST00000433034 ARPC4-010 protein_coding Homo_sapiens 0 891
ENST00000440787 ARPC4-002 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000453882 ARPC4-TTLL3-002 protein_coding Homo_sapiens 0 342
ENST00000467289 ARPC4-008 retained_intron Homo_sapiens 0 712
ENST00000479956 ARPC4-004 retained_intron Homo_sapiens 9.94922e-44 180
ENST00000485273 ARPC4-009 protein_coding Homo_sapiens 0 712
ENST00000498623 ARPC4-005 protein_coding Homo_sapiens 0 891

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