C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 209
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138823 Tmem209-003 ENSMUSG00000029782 10090 - 6:30481022-30509716 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000138823
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000138823 2.560±0.00 2.192±0.00 2.184±0.00 2.229±0.00 0.862±0.00 3.064±0.70 2.241±0.00 1.381±0.00 4.792±1.24 3.762±1.26 3.567±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_0005Y2 CIL_0005Y2_0002 CGP 6:30401868-30509783
CIL_000273 CIL_000273_0002 CGP 6:30479053-30520254

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397622 TMEM209-001 protein_coding Homo_sapiens 0 2082
ENST00000462753 TMEM209-004 protein_coding Homo_sapiens 0 2076
ENST00000471077 TMEM209-003 protein_coding Homo_sapiens 0 206
ENST00000471985 TMEM209-002 protein_coding Homo_sapiens 0 534
ENST00000473456 TMEM209-008 protein_coding Homo_sapiens 0 1387

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