C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin related protein 2/3 complex, subunit 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138900 Arpc1b-005 ENSMUSG00000029622 10090 + 5:145123974-145126932 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyOvaryPlacentaTestisENSMUST00000138900
Transcript ID Adipose Breast Kidney Ovary Placenta Testis
ENSMUST00000138900 56.262±1.13 34.097±20.41 18.529±0.00 40.337±0.00 108.575±38.23 13.678±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L5 CIL_0005L5_0003 CGP 5:145083830-145130705
CIL_0004TJ CIL_0004TJ_0002 CGP 5:145114215-145140238

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252725 ARPC1B-001 protein_coding Homo_sapiens 0 623
ENST00000432343 ARPC1B-024 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000445924 ARPC1B-018 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000451682 ARPC1B-003 protein_coding Homo_sapiens 0 623
ENST00000481997 ARPC1B-005 retained_intron Homo_sapiens 0 497
ENST00000484375 ARPC1B-025 retained_intron Homo_sapiens 0 307
ENST00000491294 ARPC1B-006 retained_intron Homo_sapiens 0 267

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