C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139287 Trim27-004 ENSMUSG00000021326 10090 + 13:21190092-21192475 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000139287
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000139287 6.127±0.00 5.318±1.12 27.709±9.72 38.881±20.97 36.481±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377199 TRIM27-001 protein_coding Homo_sapiens 0 654
ENST00000400720 TRIM27-001 protein_coding Homo_sapiens 0 654
ENST00000414543 TRIM27-003 protein_coding Homo_sapiens 0 654
ENST00000417993 TRIM27-003 protein_coding Homo_sapiens 0 654
ENST00000430208 TRIM27-003 protein_coding Homo_sapiens 0 654
ENST00000431123 TRIM27-001 protein_coding Homo_sapiens 0 654
ENST00000435528 TRIM27-001 protein_coding Homo_sapiens 0 654
ENST00000437160 TRIM27-001 protein_coding Homo_sapiens 0 654
ENST00000437383 TRIM27-003 protein_coding Homo_sapiens 0 654
ENST00000443804 TRIM27-001 protein_coding Homo_sapiens 0 654
ENST00000445968 TRIM27-002 protein_coding Homo_sapiens 0 654
ENST00000453610 TRIM27-003 protein_coding Homo_sapiens 0 654
ENST00000459807 TRIM27-004 processed_transcript Homo_sapiens 0 619
ENST00000467742 TRIM27-006 processed_transcript Homo_sapiens 0 279
ENST00000468047 TRIM27-004 processed_transcript Homo_sapiens 0 619
ENST00000468364 TRIM27-008 processed_transcript Homo_sapiens 0 279
ENST00000472315 TRIM27-006 processed_transcript Homo_sapiens 0 279
ENST00000478121 TRIM27-006 processed_transcript Homo_sapiens 0 279
ENST00000481474 TRIM27-004 retained_intron Homo_sapiens 0 619
ENST00000485666 TRIM27-004 processed_transcript Homo_sapiens 0 619
ENST00000487609 TRIM27-006 processed_transcript Homo_sapiens 0 279
ENST00000493318 TRIM27-006 retained_intron Homo_sapiens 0 619
ENST00000494480 TRIM27-006 processed_transcript Homo_sapiens 0 279
ENST00000495323 TRIM27-004 processed_transcript Homo_sapiens 0 619

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