C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481474 TRIM27-004 ENSG00000204713 9606 - 6:28903002-28923913 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLungMuscleOvaryTestisENST00000481474
Transcript ID Bladder Brain Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000481474 0.759±0.00 0.397±0.00 1.332±0.45 0.384±0.00 0.908±0.16 1.077±0.30 0.143±0.00 1.719±0.00 0.801±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021761 Trim27-001 protein_coding Mus_musculus 0 1290
ENSMUST00000139287 Trim27-004 nonsense_mediated_decay Mus_musculus 0 619
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000000008 79
ENSMUST00000125797 Atp13a2-003 retained_intron Mus_musculus 0.0000002 64

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