C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25, member 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139333 Slc25a42-002 ENSMUSG00000002346 10090 - 8:70184340-70212305 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000139333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000139333 4.912±2.27 17.910±1.63 1.890±0.43 3.504±1.40 7.296±1.35 4.272±1.46 8.553±0.95 10.810±3.58 11.913±7.25 4.183±1.03 1.945±0.24 13.350±7.83 0.344±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BC CIL_0006BC_0002 CGP 8:70184340-70234466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318596 SLC25A42-001 protein_coding Homo_sapiens 0 564
ENST00000594070 SLC25A42-002 retained_intron Homo_sapiens 0 475
ENST00000596819 SLC25A42-005 retained_intron Homo_sapiens 0 331
ENST00000597661 SLC25A42-003 retained_intron Homo_sapiens 0 252
ENST00000600251 SLC25A42-004 retained_intron Homo_sapiens 2.94273e-44 182
ENST00000600275 SLC25A42-006 processed_transcript Homo_sapiens 0 187

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