C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog gene family, member Q
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139344 Rhoq-002 ENSMUSG00000024143 10090 + 17:86963292-86995098 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverLungOvaryENSMUST00000139344
Transcript ID Adrenal Liver Lung Ovary
ENSMUST00000139344 28.561±4.14 1.301±0.00 13.213±0.00 14.299±4.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NS CIL_0001NS_0002 CGP 17:86944109-87000069
CIL_0001ND CIL_0001ND_0002 CGP 17:86963082-87025406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008360 IDA regulation of cell shape
GO:0030036 TAS actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000044690 rac3b-201 protein_coding Danio_rerio 0.00000000000004 82
ENSDART00000122905 rac3b-001 protein_coding Danio_rerio 0.00000000000004 82
ENST00000238738 RHOQ-001 protein_coding Homo_sapiens 0 712
ENST00000432183 RHOQ-003 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000437982 RHOQP3-001 processed_pseudogene Homo_sapiens 0 640
ENST00000449922 RHOQP2-001 processed_pseudogene Homo_sapiens 0 641
ENST00000473428 RHOQ-007 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000482449 RHOQ-002 protein_coding Homo_sapiens 0 453
ENST00000489471 RHOQ-006 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000494370 RHOQ-005 retained_intron Homo_sapiens 0 298
ENST00000555758 RHOQP1-001 processed_pseudogene Homo_sapiens 0 658
ENST00000557531 LRR1-005 processed_transcript Homo_sapiens 0.0000000002 69
ENST00000616091 RHOQ-201 protein_coding Homo_sapiens 0 704

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